Lab meetings

Future meetings

DataJournal Club

12.02.2018 Adinda Vegard
19.02.2018 Stephanie
05.03.2018 Ewelina Christa
12.3.2018 Laetitia Archana
26.3.2018 Flo  Pradeep
09.04.2018 Laetitia  Archana
23.04.2018 Christa  Ewelina
30.04.2018 Archana Flo
28.05.2018(both data club) Andrew Vegard
06.06.2018(Both Data club) Celine Adinda
13.06.2018 Emilie Pradeep
 18.06.2018 Pradeep Daniela
 25.06.2018 Robbrecht Stephanie
 02.07.2018 Ewelina Laetizia
 16.07.2018 Fabrizio Robbrecht
 23.07.2018 Daniela Fabrizio
 06.08.2018 Sverre  Christa
 06.08.2018 Stephanie Sverre

Meetings in the Past

2011.09.14 Journal Club by Emre

Spatial gradients and multidimensional dynamics in a neural integrator circuit (Miri A, Daie K, Arrenberg AB, Baier H, Aksay E, Tank DW.)

2011.09.21 Lab meeting by Nuray

2011.09.28 Lab meeting by Nuria

2011.10.05 Journal Club by Suresh

S.R. Olsen & R.I. Wilson. (2008) Lateral presynaptic inhibition mediates gain control in an olfactory circuit. Nature 452:956-60

2011.10.19 Lab meeting by Cameron

2011.10.26 Journal Club by Nuria

Mukamel E.A et al., (2009) Automated Analysis of Cellular Signals from Large-Scale Calcium Imaging Data.  Neuron, 63 p747-760.

2011.11.09 Lab meeting by Suresh

2011.11.16 MATLAB lecture by Nuria

2011.11.23  Lab meeting by Nuray

2011.11.30 Lab meeting-1 by Elena

2011.12.07 Journal club by Cameron:

Mack-Bucher, J.A et al., (2007) Early functional development of interneurons in the zebrafish olfactory bulb

Li, J et al., (2005) Early Development of Functional Spatial Maps in the Zebrafish Olfactory Bulb

2011.12.14 Journal club by Emre

Smear, M et al., (2011) Perception of sniff phase in mouse olfaction.

2012.01.11 Journal Club by Suresh

Kang, K et al., (2012) Modulation of TRPA1 thermal sensitivity enables sensory discrimination in Drosophila.  Nature 481: p76-80

2012.01.18 presentation by Nuria

2012.01.25 Lab meeting by Nuria

2012.02.01 Journal club by Elena

Cassenaer S and Laurent G. Conditional modulation of spike-timing-dependent plasticity for olfactory learning. Nature (2012)

2012.02.15 Lab meeting by Cameron     

2012.02.22 Lab meeting by Suresh

2012.02.29 Journal club by Emre 

Podgorski (2012) et al., Functional Clustering Drives Encoding Improvement in a Developing Brain Network during Awake Visual Learning

2012.03.14  Lab meeting by Elena

2012.03.28 Journal club by Suresh

Knobloch H.S et al., (2012) Evoked Axonal Oxytocin Release in the Central Amygdala Attenuates Fear Response. Neuron, Volume 73, p553-566

2012.04.04 Lab meeting by  Nuria

2012.04.11 Journal club by Elena

2012.05.02 Lab meeting by  Cameron and Lab report by Stephanie

2012.05.09  Journal club by Nuria

McLean, DL et al., (2008)  Continuous shifts in the active set of spinal interneurons during changes in locomotor speed. Nat Neuro, Vol 11, p1419 – 1429.

2012.05.16  Lab meeting by  Suresh

2012.05.23  Journal club by Cameron

2012.05.30  Lab meeting by Elena

2012.06.06  Journal club by Emre

2012.06.13 Journal club by Suresh

Shabel SJ (2012) et al.,  Input to the lateral habenula from the Basal Ganglia is excitatory, aversive, and suppressed by serotonin. Neuron 2012 May 10; 74(3):475-81.

2012.06.20 Lab meeting by  Nuria

2012.07.18 Journal club by Elena

Kohl M.M et al., 2011. Hemisphere-specific optogenetic stimulation reveals left-right asymmetry of hippocampal plasticity.

2012.07.25 FENS-2012  meeting review by  Cameron

2012.08.01  Journal club by Nuria

Bianco, IH et al., 2011 Prey capture behavior evoked by simple visual stimuli in larval zebrafish

2012.08.08  Abi’s Final Lab report

2012.09.05  Journal club by Florence

Jang, H et al., 2012. Neuromodulatory State and Sex Specify Alternative Behaviors through Antagonistic Synaptic Pathways in C. elegans. Neuron 75, 585-595

2012.09.12  Lab meeting by  Suresh

2012.09.19  Journal club by Cameron

2012.09.26 Lab meeting by Elena

2012.10.03  Final lab report by Ares

2012.10.10  Journal club by Emre

2012.10.17  Lab meeting by Elena/Lecture by Emre: Anatomy of zebrafish brain

2012.10.24  Lecture by Suresh: Structure and function of the Habenular circuits/Journal club by Luis

2012.10.31  Lab meeting by Cameron/ MATLAB lecture by Nuria

2012.11.07  Lab meeting by Florence/ Journal Club by Carmen:

Nikolaou, N et al., 2012. Parametric Functional Maps of Visual Inputs to the Tectum. Neuron. 76(2):317-24.

2012.11.14  Journal Club by Stephanie/ Journal Club by Luis

Paskin, TR and Byrd-Jacobs, CA.,  2012. Reversible deafferentation of the adult zebrafish olfactory bulb affects glomerular distribution and olfactory-mediated behavior. Behavioral Brain Research 235(2):293-301.

Marín-Burgin A., et al., 2012. Unique processing during a period of high excitation/inhibition balance in adult-born neurons. Science 335, p 1238-42.

2012.11.28 Emre (lab meeting) // Cameron (JC)

Schärer YP, Shum J, Moressis A, Friedrich RW.2012. Dopaminergic modulation of synaptic transmission and neuronal activity patterns in the zebrafish homolog of olfactory cortex. Front Neural Circuits, 6:76.

 2012.12.05  Carmen (progress report) // Suresh (JC)

Lammel S., et al., 2012. Input-specific control of reward and aversion in the ventral tegmental area. Nature 491(7423): 212-7.

 2013.01.09  Florence (JC)

Derjean D., et al. 2010. A novel neural substrate for the transformation of olfactory inputs into motor output. PLoS Biol 21;8(12)

 2013.01.16  Cameron (progress report) // seminar report by Emre, Carmen &Elena

2013.01.23 Stephanie (progress report) // Emre (lab meeting)

2013.01.30 Luis (progress report) // Nuria (JC)

Maier JX, Wachowiak M, Katz DB. 2012. Chemosensory convergence on primary olfactory cortex. J Neurosci. 32(48):17037-47.

2013.02.19     Florence (progress report) // Nuria (JC)

Arrenberg AB, Del Bene F, Baier H., 2009. Optical control of zebrafish behavior with halorhodopsin. PNAS 106(42):17968-73.

2013.03.13   Saar (progress report) // Cameron (JC)

Markopoulos F, Rokni D, Gire DH, Murthy VN,  2012. Functional properties of cortical feedback projections to the olfactory bulb. Neuron. 76(6):1175-88.

2013.03.20   Elena (progress report)// Emre (seminar report)

2013.03.27     Suresh (progress report)

2013.04.03      Carmen (JC)// Luis (JC)

Feldt Muldoon S, Soltesz I, Cossart R. 2013. Spatially clustered neuronal assemblies comprise the microstructure of synchrony in chronically epileptic networks. PNAS 110(9):3567-72.

Gaudry Q, Hong EJ, Kain J, de Bivort BL, Wilson RI. 2013. Asymmetric neurotransmitter release enables rapid odour lateralization in Drosophila. Nature. 493(7432):424-8.

2013.04.10      Nuria (progress report)

2013.04.17      Cameron (progress report)// Suresh (JC)

Angelo K, et al. 2012 A biophysical signature of network affiliation and sensory processing in mitral cells. Nature. 488(7411):375-8.

2013.05.01       Florence (progress report)// Luis (seminar report)

 2013.05.08      Carmen (progress report)// Elena (JC)

Caron SJ, Ruta V, Abbott LF, Axel R. 2013. Random convergence of olfactory inputs in the Drosophila mushroom body. Nature. 497(7447):113-7.

2013.05.15     Stephanie (progress report)// Florence (JC)

Zhang J, Pacifico R, Cawley D, Feinstein P, Bozza T. 2013. Ultrasensitive detection of amines by a trace amine-associated receptor. J Neurosci. 33(7):3228-39.

Dewan A, Pacifico R, Zhan R, Rinberg D, Bozza T. 2013. Non-redundant coding of aversive odours in the main olfactory pathway. Nature. 497(7450):486-9.

2013.05.29     Nuria (JC)

Stokes et al . 2013. Dynamic coding for cognitive control in prefrontal cortex. Neuron 78(2):364-75.

 2013.06.05      Suresh (progress report)// Cameron (JC)

De Marco et al,. 2013. Optogenetic elevation of endogenous glucocorticoid level in larval zebrafish. Front Neural Circuits, 7:82.

2013.06.19   Stephanie (progress report)

2013.07.03    Pr. A. Vanderplasschen seminar

2013.07.17    Luis (JC) // Emre (seminar report)

Gonçalves JT, Anstey JE, Golshani P, Portera-Cailliau C. Circuit level defects in the developing neocortex of Fragile X mice. Nat Neurosci. 2013.

2013.07.24      Florence (JC) // Jack/Yiming/Xueting (progress reports)

Gire DH, Whitesell JD, Doucette W, Restrepo D. Information for decision-making and stimulus identification is multiplexed in sensory cortex. Nat Neurosci. 2013 Aug;16(8):991-3.

2013.08.07    Lea’s seminar

2013.08.14    Suresh (JC)

Esposti F, Johnston J, Rosa JM, Leung KM, Lagnado L. Olfactory Stimulation Selectively Modulates the OFF Pathway in the Retina of Zebrafish. Neuron. 2013 Jul 10;79(1):97-110.

2013.08.21 Carmen (pre-doc talk) // Luis (progress report)

2013.09 .11 Xueting (progress report)// Nuria-Carmen (seminar report)

 

17-10-2013 Nuria’s JC on Taste circuits/Luis conference report

23-10-2013 Carmen’s literature seminar/ Stephanie’s JC

30-10-2013  No lab meeting

06-11-2013  No lab meeting

14-11-2013  Luis JC

Zhu, P et al., Equalization of odor representations by a network of electrically coupled inhibitory interneurons. Nat Neuro 2013

20-11-2013  Suresh’s SFN meeting report Part-1/Saar’s JC

Hunt, R., et al., A novel zebrafish model of hyperthermia-induced seizures reveals a role for TRPV4 channels and NMDA-type glutamate receptors. Experimental Neurology 2012.

27-11-2013  Suresh’s SFN meeting report part-2/Florence JC

Yan et al. Precise circuitry links bilaterally symmetric olfactory maps. Neuron, 2008

04-12-2013 Luis lab meeting/Suresh’s JC

Stephenson-Jones, M et al., Independent circuits in the basal ganglia for the evaluation and selection of actions. PNAS 2013

11-12-2013   Nuria’s lab meeting/Carmen’s JC

16-12-2013 Suresh’s lab meeting

08-01-2014  Emre Journal club

Fisek, M and Wilson, RI (2014). Stereotyped connectivity and computations in higher-order olfactory neurons. Nature Neuroscience

22-01-2014  Stephanie’s lab meeting/Nuria conference report

29-01-2014 Almu’s lab meeting

05-02-2014 Saar’s lab meeting

12-02-2014  Cameron’s Lab meeting/Florence JC

Kishimoto, N et al., Interhemispheric asymmetry of olfactory input-dependent neuronal specification in the adult brain. Nat Neuro 2013

19-02-2014 Nuria JC

Chung, K et al., Structural and molecular interrogation of intact biological systems. Nature 2013

26-02-2014 Carmen’s lab meeting/Luis JC

Matthew Lovett-Baron et al.,Dendritic Inhibition in the Hippocampus Supports Fear Learning. Science 2014

29-01-2014 Almu’s lab meeting/Florence JC

05-02-2014 Saar’s lab meeting

05-03-2014 Nuria’s PhD related presentation/Suresh JC

Rieubland, S et al., Structured Connectivity in Cerebellar Inhibitory Networks. Neuron 2014

12-03-2014 Florence’s lab meeting/ Cameron JC

19-03-2014 Luis lab meeting/Saar JC

26-03-2014 Suresh lab meeting/Stephanie JC

02-04-2014 Carmen’s JC/Lea JC

09-04-2014 Nuria’s lab meeting/Lea JC/Master student short talk

16-04-2014   Cameron’s  lab meeting /Stephanie’s JC

23-04-2014  Carmen’s  lab meeting/ Florence’s JC

07-05-2014 Florence’s  lab meeting/Suresh JC (volunteered)

Miyasaka, N et al (2013) Olfactory projectome in the zebrafish forebrain revealed by genetic single-neuron labelling. Nature Communications

21-05-2014  Suresh’s lab meeting/Ewelina JC

28-05-2014  Oliver Braubach  talk

 04-06-2014 Stephanie’s lab meeting/Nuria JC

Clancy, K et al (2014) Volitional modulation of optically recorded calcium signals during neuroprosthetic learning. Nature Neuroscience

11-06-2014  Suresh’s lab meeting/Saar’s mock defense

18-06-2014 Ewelina JC/Carmen JC

Stegmaier J et al (2014) Automated prior knowledge-based quantification of neuronal patterns in the spinal cord of zebrafish.

25-06-2014  Saar’s Mock defense /Suresh mid term presentation

23-07-2014 Ewelina lab meeting/Almu JC

Stewart et al (2014) Developing zebrafish models of autism spectrum disorder (ASD)

30-07-2014 Almu  lab meeting/Lea JC

Kollo, M et al., (2014) Silent’ mitral cells dominate odor responses in the olfactory  bulb of awake mice. Nat Neuroscience

06-08-2014 Luis  lab meeting/Robbrecht behavior course update
13-08-2014 Lea’s lab meeting/Cameron JC
20-08-2014 Robbrecht lab meeting /Suresh JC

Krishan, S et al (2014) The right dorsal habenula limits attraction to an odor in zebrafish. Current Biology

27-08-2014  Ozge lab meeting /Luis’s JC
17-09-2014  Robbrecht JC/Suresh Literature seminar
29-09-2014 Flo lab meeting/Luis JC
Galán, R et al (2004) Odor-Driven Attractor Dynamics in the Antennal Lobe Allow for Simple and Rapid Olfactory Pattern Classication
01-10-2014 Robbrecht lab meeting/Nuria JC
Zhu, P et al (2012) High-resolution optical control of spatiotemporal neuronal activity patterns in zebrafish using a digital micromirror device
Wu, MC et al (2014) Optogenetic control of selective neural activity in multiple freely moving Drosophila adults
08-10-2014 Carmen lab meeting/Stephanie JC
Shabel , S et al (2014) GABA/glutamate co-release controls habenula output and is modified by antidepressant treatment
22-10-2014 Nuria lab meeting/Vasudev introduction
29-10-2014 Luis lab meeting/Carmen JC
Freeman , J et al (2014) Mapping brain activity at scale with cluster computing
05-11-2014 Stephanie lab meeting/Suresh literature seminar
26-11-2014 Luis meeting report/Flo JC
Petzol et al, 2009. Nature Neuroscience.Serotonergic modulation of odor input to the mammalian olfactory bulb
03-12-2014 Suresh defense preparation/Robbrecht JC
Amo et al., The Habenulo-Raphe Serotonergic Circuit Encodes an Aversive Expectation Value Essential for Adaptive
Active Avoidance of Danger, Neuron (2014)
10-12-2014 Suresh final defense tryout
17-12-2014 Flo&Emre meeting report
07-01-2015 Flo lab meeting/Cameron review presentation
14-01-2015 Carmen lab meeting/Luis JC
Nagel et al., Synaptic and circuit mechanisms promoting broadband transmission of olfactory stimulus dynamics, Nature Neuroscience (2014)
21-01-2015 Robbrecht mock defense/Nuria JC
Herzfeld et al., A memory of errors in sensorimotor learning, Science (2014)
28-01-2015 Ewelina lab meeting/Stephanie JC
Ghosh&Chattarji, Neuronal encoding of the switch from specific to generalized fear, Nature Neuroscience (2014)
04-02-2015 Cameron lab meeting
11-02-2015 Nuria lab meeting/Carmen JC
Jennings et al., Visualizing Hypothalamic Network Dynamics for Appetitive and Consummatory Behaviors, Cell (2015)
18-02-2015 Stephanie lab meeting/Ewelina JC
Hafting et al., Microstructure of a spatial map in the entorhinal cortex, Nature (2005)
25-02-2015 Luis lab meeting/Robbrecht JC
Daie et al., Spatial Patterns of Persistent Neural Activity Vary with the Behavioral Context of Short-Term Memory, Neuron (2015)
25-02-2015 Flo lab meeting/Suresh JC
Rothwell et al., Autism-Associated Neuroligin-3 Mutations Commonly Impair Striatal Circuits to Boost Repetitive Behaviors, Cell (2014)
25-02-2015 Carmen lab meeting/Suresh JC
Rothwell et al., Autism-Associated Neuroligin-3 Mutations Commonly Impair Striatal Circuits to Boost Repetitive Behaviors, Cell (2014)
11-03-2015 Flo lab meeting/Suresh JC
Lui&Wilson, Thermosensory processing in the Drosophila brain, Nature (2015)
18-03-2015 Suresh lab meeting/Cameron JC
Ablain et al., A CRISPR/Cas9 Vector System for Tissue-Specific Gene Disruption in Zebrafish, Developmental Cell (2015)
25-03-2015 Carmen lab meeting/Flo JC
Bianco&Engert, Visuomotor Transformations Underlying Hunting Behavior in Zebrafish, Current Biology (2015)
15-04-2015 Robbrecht lab meeting/Luis JC
Parnas et al., Odor Discrimination in Drosophila: From Neural Population Codes to Behavior, Neuron (2013)
06-05-2015 Max JC
Peron et al., A Cellular Resolution Map of Barrel Cortex Activity during Tactile Behavior, Neuron (2015)
13-05-2015 Cameron lab meeting
20-05-2015 Filip lab meeting/Stephanie JC
Brockmann et al., Coupled Oscillations Mediate Directed Interactions between Prefrontal Cortex and Hippocampus of the Neonatal Rat, Neuron (2011)
03-06-2015 Max lab meeting/Suresh JC
Chen et al., Expansion microscopy, Science (2015)
17-06-2015 Cecilia lab meeting/Filip JC
Packer et al., Simultaneous all-optical manipulation and recording of neural circuit activity with cellular resolution in vivo ,Nature Methods (2015)
24-06-2015 Nathalie lab meeting/Cecilia JC
Shah et al., Motile Cilia of Human Airway Epithelia Are Chemosensory, Science (2009)
08-07-2015 Carmen JC
Harris et al., Representations of Taste Modality in the Drosophila Brain, Neuron (2015)
15-07-2015 Luis lab meeting/Ewelina JC
Wertz et al., Single-cell–initiated monosynaptic tracing reveals layer-specific cortical network modules, Science (2015)
22-07-2015 rearranging lab tasks/Robbrecht JC
Temizer et al., A Visual Pathway for Looming-Evoked Escape in Larval Zebrafish, Current Biology (2015)
05-08-2015 Carmen data, Luis JC
Hong and Wilson, Simultaneous encoding of odors by channels with diverse sensitivity to inhibition, Neuron (2015)
12-08-2015 Robbrecht Arduino introduction, Stephanie JC
Lacoste et al., A Convergent and Essential Interneuron Pathway for Mauthner-Cell-Mediated Escapes, Current Biology (2015)
19-08-2015 Flo data, Max JC
Matsui, Hideaki, et al., Functional regionalization of the teleost cerebellum analyzed in vivo, Proceedings of the National Academy of Sciences (2014)
09-09-2015 Robbrecht data, Flo meeting report
16-09-2015 Suresh data, Nathalie JC
von der Weid et al., Large-scale transcriptional profiling of chemosensory
neurons identifies receptor-ligand pairs in vivo, Nature Neuroscience (2015)
07-10-2015 Max data, Filip JC
Favre-Bulle et al., Scattering of Sculpted Light in Intact Brain Tissue, with implications for Optogenetics, Scientific Reports (2015)
14-10-2015 Fabrizio data, Carmen JC
Randlett, et al., Whole-brain activity mapping onto a zebrafish brain atlas, Nature Methods (2015)
21-10-2015 Stephanie data, Ewelina JC
Tian, et al., Habenula Lesions Reveal that Multiple Mechanisms Underlie Dopamine Prediction Errors, Neuron (2015)

30-01-2016 Christoph Progress report, Stephanie Journal Club

Luczak A, Bartho P, Harris KD. Gating of sensory input by spontaneous cortical activity. The Journal of neuroscience : the official journal of the Society for Neuroscience. 2013;33(4):1684-1695. doi:10.1523/JNEUROSCI.2928-12.2013.
06-02-2017 Sverre data, Flo JC
Hitoshi Okamoto, For Motor Adjustments, Serotonin Steps In, Cell, Volume 167, Issue 4, 3 November 2016, Pages 886-887
06-02-2017 Christa data, Pradeep JC
Bai-bing Zhang et al., Left Habenula Mediates Light-Preference Behavior in Zebrafish via an Asymmetrical Visual Pathway,Neuron, Volume 93, Issue 4,22 February 2017
15-05-2017 Etienne data, Sverre JC
Sugaya et al., Crucial Roles of the Endocannabinoid 2-Arachidonoylglycerol in the Suppression of Epileptic Seizures,Cell Reports, Volume 16, Issue 5, 2 August 2016, Pages 1405–1415
22-05-2017 Tom data, Etienne JC
Pnevmatikakis, Eftychios A. et al. “Simultaneous Denoising, Deconvolution, and Demixing of Calcium Imaging Data.” Neuron 89.2 (2016): 285–299. PMC. Web. 22 May 2017
25-09-2017 Jan data, Christa JC
Verasztó et al., Ciliomotor circuitry underlying whole-body coordination of ciliary activity in the Platynereis larva, Elife, 2017 May 16;6.  doi: 10.7554/eLife.26000.
16-10-2017 Ewelina data, Florence JC
Nectow et al.,Identification of a Brainstem Circuit Controlling
Feeding,Cell vol.170, Issue 3, 27 July 2017, Pages 429–442.
16-10-2017 Vegard data, Stephanie JC
Lecca et al., Aversive stimuli drive hypothalamus-to-habenula excitation to promote escape behavior, eLife 2017;6:e30697